Reads a Seurat RDS object and writes an H5AD AnnData file while preserving
supported counts, normalized expression, metadata, feature metadata, and
dimensional reductions.
Usage
convert_seurat_to_anndata(input, output, assay = "RNA")
Arguments
- input
Path to an input Seurat .rds file.
- output
Path to the output .h5ad file.
- assay
Name of the Seurat assay to convert. Defaults to "RNA".
Value
The output path, returned invisibly.